CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr15.1507 rna-evm.model.Chr15.1507 Chr15 43904723 43911894 uncharacterized protein nan K09060
gene-evm.TU.Chr15.1508 rna-evm.model.Chr15.1508 Chr15 43918080 43920172 uncharacterized protein nan nan
gene-evm.TU.Chr15.1509 rna-evm.model.Chr15.1509 Chr15 43925664 43930516 uncharacterized protein nan K09819
gene-evm.TU.Chr15.151 rna-evm.model.Chr15.151 Chr15 3506698 3544889 uncharacterized protein nan K25552
gene-evm.TU.Chr15.1510 rna-evm.model.Chr15.1510 Chr15 43932820 43937077 PREDICTED: Rho-associated protein kinase 2 [EC:2.7.11.1] nan K03969
gene-evm.TU.Chr15.1511 rna-evm.model.Chr15.1511 Chr15 43966503 43979542 PREDICTED: Gelsolin-like protein 2 GO:0051015 K05768
gene-evm.TU.Chr15.1512 rna-evm.model.Chr15.1512 Chr15 43984830 43989378 uncharacterized protein nan K09849
gene-evm.TU.Chr15.1513 rna-evm.model.Chr15.1513 Chr15 44002914 44044039 uncharacterized protein nan K06449
gene-evm.TU.Chr15.1514 rna-evm.model.Chr15.1514 Chr15 44046459 44064464 PREDICTED: Cyclic nucleotide-binding domain-containing protein 2 nan K07376
gene-evm.TU.Chr15.1516 rna-evm.model.Chr15.1516 Chr15 44117076 44123752 PREDICTED: Sulfoquinovosidase GO:0004553;GO:0005975 K15922

For more detailed data, you can explore the Download section to access the full dataset.