CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr15.1487 rna-evm.model.Chr15.1487 Chr15 43605682 43613466 uncharacterized protein nan K06449
gene-evm.TU.Chr15.1488 rna-evm.model.Chr15.1488 Chr15 43620999 43624954 PREDICTED: Heat shock 70 kDa protein 12B nan K04043
gene-evm.TU.Chr15.1489 rna-evm.model.Chr15.1489 Chr15 43626384 43633659 uncharacterized protein nan K24050
gene-evm.TU.Chr15.149 rna-evm.model.Chr15.149 Chr15 3344290 3348257 PREDICTED: Small nuclear ribonucleoprotein F GO:0000398;GO:0005732 K11098
gene-evm.TU.Chr15.1490 rna-evm.model.Chr15.1490 Chr15 43641681 43646436 PREDICTED: titin-like nan K04266
gene-evm.TU.Chr15.1491 rna-evm.model.Chr15.1491 Chr15 43648670 43652930 PREDICTED: Rho-associated protein kinase 2 [EC:2.7.11.1] nan K03969
gene-evm.TU.Chr15.1492 rna-evm.model.Chr15.1492 Chr15 43666487 43676759 PREDICTED: Gelsolin-like protein 2 GO:0051015 K05768
gene-evm.TU.Chr15.1493 rna-evm.model.Chr15.1493 Chr15 43683434 43687026 PREDICTED: protein SHQ1 nan K03175
gene-evm.TU.Chr15.1494 rna-evm.model.Chr15.1494 Chr15 43701370 43713459 uncharacterized protein nan K06449
gene-evm.TU.Chr15.1495 rna-evm.model.Chr15.1495 Chr15 43721022 43745261 uncharacterized protein nan K20282

For more detailed data, you can explore the Download section to access the full dataset.