CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr15.1441 rna-evm.model.Chr15.1441 Chr15 42420889 42493420 PREDICTED: Filamin-A GO:0005515 K04437
gene-evm.TU.Chr15.1442 rna-evm.model.Chr15.1442 Chr15 42536103 42571795 PREDICTED: ATP-dependent DNA/RNA helicase DHX36 GO:0003676;GO:0004386;GO:0005524 K14442
gene-evm.TU.Chr15.1443 rna-evm.model.Chr15.1443 Chr15 42596228 42610572 uncharacterized protein nan K19232
gene-evm.TU.Chr15.1444 rna-evm.model.Chr15.1444 Chr15 42623955 42635438 PREDICTED: EF-hand calcium-binding domain-containing protein 12 GO:0005509 K13807
gene-evm.TU.Chr15.1446 rna-evm.model.Chr15.1446 Chr15 42662096 42671756 PREDICTED: Leucine-rich repeat neuronal protein 1 GO:0005515 K24492
gene-evm.TU.Chr15.1447_evm.TU.Chr15.1449 rna-evm.model.Chr15.1447_evm.model.Chr15.1449 Chr15 42805405 42819731 PREDICTED: Brain protein I3 nan K06457
gene-evm.TU.Chr15.1450 rna-evm.model.Chr15.1450 Chr15 42821358 42827548 uncharacterized protein nan K25640
gene-evm.TU.Chr15.1451 rna-evm.model.Chr15.1451 Chr15 42831293 42847771 PREDICTED: Coiled-coil domain-containing protein 146 nan K25554
gene-evm.TU.Chr15.1452 rna-evm.model.Chr15.1452 Chr15 42848046 42866743 PREDICTED: RuvB-like 1 GO:0003678;GO:0005524;GO:0031011;GO:0035267;GO:0043139;GO:0097255 K04499
gene-evm.TU.Chr15.1453 rna-evm.model.Chr15.1453 Chr15 42910875 42915843 PREDICTED: S-crystallin SL11 GO:0005515 K04097

For more detailed data, you can explore the Download section to access the full dataset.