CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr15.1350 rna-evm.model.Chr15.1350 Chr15 39464597 39468813 uncharacterized protein nan K25256
gene-evm.TU.Chr15.1351 rna-evm.model.Chr15.1351 Chr15 39468905 39497905 PREDICTED: Venom prothrombin activator oscutarin-C non-catalytic subunit nan K17253
gene-evm.TU.Chr15.1352 rna-evm.model.Chr15.1352 Chr15 39498211 39503402 PREDICTED: solute carrier family 23 (nucleobase transporter), member 1/2 nan K22721
gene-evm.TU.Chr15.1353 rna-evm.model.Chr15.1353 Chr15 39508709 39521729 PREDICTED: Kelch-like protein 36 GO:0005515 K13958
gene-evm.TU.Chr15.1354 rna-evm.model.Chr15.1354 Chr15 39530258 39533793 PREDICTED: Kelch-like protein 15 GO:0005515 K10452
gene-evm.TU.Chr15.1355 rna-evm.model.Chr15.1355 Chr15 39546018 39555036 PREDICTED: Egalitarian protein homolog nan K18740
gene-evm.TU.Chr15.1356 rna-evm.model.Chr15.1356 Chr15 39561069 39570006 PREDICTED: Sacsin nan K17592
gene-evm.TU.Chr15.1357 rna-evm.model.Chr15.1357 Chr15 39570021 39591308 PREDICTED: Sacsin nan K17592
gene-evm.TU.Chr15.1358 rna-evm.model.Chr15.1358 Chr15 39596005 39606571 PREDICTED: Ubiquitin carboxyl-terminal hydrolase 20 GO:0016579;GO:0004843 K11833
gene-evm.TU.Chr15.1359 rna-evm.model.Chr15.1359 Chr15 39623546 39663530 PREDICTED: Sodium- and chloride-dependent glycine transporter 1 GO:0016020 K05038

For more detailed data, you can explore the Download section to access the full dataset.