CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr14.883 rna-evm.model.Chr14.883 Chr14 27359651 27365403 uncharacterized protein nan K24465
gene-evm.TU.Chr14.884 rna-evm.model.Chr14.884 Chr14 27374895 27392907 PREDICTED: Transcriptional adapter 1 GO:0070461 K11317
gene-evm.TU.Chr14.885 rna-evm.model.Chr14.885 Chr14 27395981 27403247 PREDICTED: WD repeat-containing protein 5 GO:0005515 K14963
gene-evm.TU.Chr14.886 rna-evm.model.Chr14.886.1 Chr14 27409548 27415208 PREDICTED: Bromodomain-containing protein 4 GO:0005515 K08871
gene-evm.TU.Chr14.887 rna-evm.model.Chr14.887 Chr14 27557085 27558400 PREDICTED: Dopamine beta-hydroxylase GO:0004497;GO:0005507;GO:0016715;GO:0055114 K00503
gene-evm.TU.Chr14.888 rna-evm.model.Chr14.888 Chr14 27591309 27593152 uncharacterized protein GO:0003676 K23204
gene-evm.TU.Chr14.889 rna-evm.model.Chr14.889 Chr14 27594268 27596610 PREDICTED: inner nuclear membrane protein Man1 GO:0008270 K21233
gene-evm.TU.Chr14.891 rna-evm.model.Chr14.891 Chr14 27740005 27740442 uncharacterized protein nan nan
gene-evm.TU.Chr14.892 rna-evm.model.Chr14.892 Chr14 27741120 27742265 PREDICTED: Uncharacterized protein KIAA1958 homolog nan K24675
gene-evm.TU.Chr14.895 rna-evm.model.Chr14.895 Chr14 27977254 27980188 PREDICTED: exocyst complex component 1 nan K09892

For more detailed data, you can explore the Download section to access the full dataset.