CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr14.734 rna-evm.model.Chr14.734 Chr14 22588314 22622345 PREDICTED: Ubiquitin-associated domain-containing protein 1 nan K12174
gene-evm.TU.Chr14.735 rna-evm.model.Chr14.735 Chr14 22633360 22634188 uncharacterized protein nan K01142
gene-evm.TU.Chr14.736 rna-evm.model.Chr14.736 Chr14 22649659 22650068 uncharacterized protein GO:0003677;GO:0006313;GO:0015074 nan
gene-evm.TU.Chr14.739 rna-evm.model.Chr14.739 Chr14 22723023 22724084 PREDICTED: exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-] nan K10421
gene-evm.TU.Chr14.74 rna-evm.model.Chr14.74 Chr14 2449219 2449644 PREDICTED: Putative nuclease HARBI1 nan K23222
gene-evm.TU.Chr14.742 rna-evm.model.Chr14.742 Chr14 22873038 22921970 uncharacterized protein GO:0003676 K22534
gene-evm.TU.Chr14.743 rna-evm.model.Chr14.743 Chr14 22922841 22933669 uncharacterized protein nan nan
gene-evm.TU.Chr14.744 rna-evm.model.Chr14.744 Chr14 22935057 22945346 uncharacterized protein nan K14828
gene-evm.TU.Chr14.745 rna-evm.model.Chr14.745 Chr14 23073007 23093296 PREDICTED: Iron-sulfur protein NUBPL nan K03593
gene-evm.TU.Chr14.746 rna-evm.model.Chr14.746 Chr14 23093486 23131397 PREDICTED: Protein GVQW3 nan K03593

For more detailed data, you can explore the Download section to access the full dataset.