CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr14.682 rna-evm.model.Chr14.682 Chr14 21093076 21105588 PREDICTED: Ras-related protein Rab-14 GO:0003924;GO:0005525 K07881
gene-evm.TU.Chr14.683 rna-evm.model.Chr14.683 Chr14 21118500 21119895 uncharacterized protein nan K22246
gene-evm.TU.Chr14.684 rna-evm.model.Chr14.684 Chr14 21122264 21122959 uncharacterized protein nan nan
gene-evm.TU.Chr14.685 rna-evm.model.Chr14.685 Chr14 21131009 21132238 uncharacterized protein nan nan
gene-evm.TU.Chr14.686 rna-evm.model.Chr14.686 Chr14 21139303 21140202 uncharacterized protein nan K24492
gene-evm.TU.Chr14.687 rna-evm.model.Chr14.687 Chr14 21145248 21146502 PREDICTED: Glutaredoxin-1 GO:0009055;GO:0015035;GO:0045454 K03676
gene-evm.TU.Chr14.688 rna-evm.model.Chr14.688 Chr14 21149836 21153633 PREDICTED: Tubulin alpha-1A chain GO:0003924;GO:0005200;GO:0005525;GO:0005874;GO:0007017 K07374
gene-evm.TU.Chr14.689 rna-evm.model.Chr14.689 Chr14 21157984 21160973 PREDICTED: Tubulin alpha-1C chain GO:0003924;GO:0005200;GO:0005525;GO:0005874;GO:0007017 K07374
gene-evm.TU.Chr14.690 rna-evm.model.Chr14.690 Chr14 21166146 21186052 PREDICTED: eEF1A lysine and N-terminal methyltransferase GO:0008168 K25166
gene-evm.TU.Chr14.691 rna-evm.model.Chr14.691 Chr14 21187875 21198761 PREDICTED: Target of rapamycin complex 2 subunit MAPKAP1 nan K20410

For more detailed data, you can explore the Download section to access the full dataset.