CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr14.722 rna-evm.model.Chr14.722 Chr14 21781536 21829843 PREDICTED: Actin-related protein 5 nan K11672
gene-evm.TU.Chr14.723 rna-evm.model.Chr14.723 Chr14 21843740 21865997 PREDICTED: LIM/homeobox protein Lhx9 GO:0003677 K09373
gene-evm.TU.Chr14.724 rna-evm.model.Chr14.724 Chr14 21877972 21881095 PREDICTED: Macrophage mannose receptor 1 nan K06468
gene-evm.TU.Chr14.726 rna-evm.model.Chr14.726 Chr14 21893257 21907349 PREDICTED: LIM/homeobox protein Lhx9 GO:0003677 K09373
gene-evm.TU.Chr14.727 rna-evm.model.Chr14.727 Chr14 21943689 22036490 uncharacterized protein nan K05858
gene-evm.TU.Chr14.728 rna-evm.model.Chr14.728 Chr14 22068540 22112748 uncharacterized protein nan nan
gene-evm.TU.Chr14.729 rna-evm.model.Chr14.729 Chr14 22116689 22116847 uncharacterized protein nan nan
gene-evm.TU.Chr14.73 rna-evm.model.Chr14.73 Chr14 2432204 2440774 PREDICTED: nuclear apoptosis-inducing factor 1 nan K23221
gene-evm.TU.Chr14.730 rna-evm.model.Chr14.730 Chr14 22187521 22196893 PREDICTED: elongation factor Ts nan K02342
gene-evm.TU.Chr14.733 rna-evm.model.Chr14.733 Chr14 22494175 22509713 uncharacterized protein nan nan

For more detailed data, you can explore the Download section to access the full dataset.