CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr14.623 rna-evm.model.Chr14.623 Chr14 19642001 19643996 uncharacterized protein nan nan
gene-evm.TU.Chr14.624 rna-evm.model.Chr14.624 Chr14 19646331 19690184 PREDICTED: Proprotein convertase subtilisin/kexin type 4 GO:0004252;GO:0006508 K08671
gene-evm.TU.Chr14.629 rna-evm.model.Chr14.629 Chr14 19754007 19759667 uncharacterized protein nan nan
gene-evm.TU.Chr14.63 rna-evm.model.Chr14.63 Chr14 1990749 2013464 PREDICTED: Exonuclease mut-7 homolog GO:0003676;GO:0006139;GO:0008408 K09122
gene-evm.TU.Chr14.631 rna-evm.model.Chr14.631 Chr14 19795656 19811325 PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase alpha GO:0016746 K13509
gene-evm.TU.Chr14.632 rna-evm.model.Chr14.632 Chr14 19811875 19815844 PREDICTED: glucuronosyltransferase [EC:2.4.1.17] nan K04763
gene-evm.TU.Chr14.633 rna-evm.model.Chr14.633 Chr14 19828076 19860577 PREDICTED: CutA-like protein nan K06006
gene-evm.TU.Chr14.634 rna-evm.model.Chr14.634 Chr14 19862461 19883716 PREDICTED: Tetratricopeptide repeat protein 16 GO:0005515 K09523
gene-evm.TU.Chr14.636 rna-evm.model.Chr14.636 Chr14 19892461 19898300 uncharacterized protein nan K22190
gene-evm.TU.Chr14.637 rna-evm.model.Chr14.637 Chr14 19904526 19909952 PREDICTED: Ankyrin-3 GO:0005515 K15503

For more detailed data, you can explore the Download section to access the full dataset.