CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr14.487 rna-evm.model.Chr14.487 Chr14 15892600 15892914 uncharacterized protein nan nan
gene-evm.TU.Chr14.488 rna-evm.model.Chr14.488 Chr14 15893017 15896284 PREDICTED: CUB and sushi domain-containing protein GO:0005576;GO:0006030;GO:0008061 nan
gene-evm.TU.Chr14.49 rna-evm.model.Chr14.49 Chr14 1684895 1690269 PREDICTED: proline-rich receptor-like protein kinase PERK9 nan K19475
gene-evm.TU.Chr14.493 rna-evm.model.Chr14.493 Chr14 16024552 16024953 uncharacterized protein nan nan
gene-evm.TU.Chr14.494 rna-evm.model.Chr14.494 Chr14 16025170 16027677 PREDICTED: Putative protein FAM47C nan K02410
gene-evm.TU.Chr14.495 rna-evm.model.Chr14.495 Chr14 16038405 16043121 uncharacterized protein nan K02186
gene-evm.TU.Chr14.498 rna-evm.model.Chr14.498 Chr14 16100522 16106144 uncharacterized protein nan K26467
gene-evm.TU.Chr14.499 rna-evm.model.Chr14.499 Chr14 16106192 16146827 PREDICTED: Centrosome-associated protein 350 GO:0005813;GO:0008017;GO:0034453 K16768
gene-evm.TU.Chr14.500 rna-evm.model.Chr14.500 Chr14 16173235 16180505 PREDICTED: dynein heavy chain, axonemal nan K02186
gene-evm.TU.Chr14.503 rna-evm.model.Chr14.503 Chr14 16334849 16344259 PREDICTED: CD109 antigen nan K09892

For more detailed data, you can explore the Download section to access the full dataset.