CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr14.448 rna-evm.model.Chr14.448 Chr14 14485067 14488596 PREDICTED: Centrosome-associated protein 350 GO:0005813;GO:0008017;GO:0034453 K16768
gene-evm.TU.Chr14.449 rna-evm.model.Chr14.449 Chr14 14493115 14503090 PREDICTED: Centrosome-associated protein 350 GO:0005813;GO:0008017;GO:0034453 K16768
gene-evm.TU.Chr14.45 rna-evm.model.Chr14.45 Chr14 1585827 1613048 PREDICTED: Mannan endo-1,4-beta-mannosidase nan K19355
gene-evm.TU.Chr14.451 rna-evm.model.Chr14.451 Chr14 14540806 14543210 uncharacterized protein nan K15985
gene-evm.TU.Chr14.454 rna-evm.model.Chr14.454 Chr14 14590518 14688011 uncharacterized protein nan K18186
gene-evm.TU.Chr14.456 rna-evm.model.Chr14.456 Chr14 14741496 14759147 PREDICTED: Queuine tRNA-ribosyltransferase accessory subunit 2 GO:0006400;GO:0016763 K15407
gene-evm.TU.Chr14.457 rna-evm.model.Chr14.457 Chr14 14760728 14774189 PREDICTED: Negative elongation factor E GO:0003676;GO:0006355;GO:0032021 K15182
gene-evm.TU.Chr14.46 rna-evm.model.Chr14.46 Chr14 1613161 1616968 PREDICTED: MORN repeat-containing protein 5 nan K19755
gene-evm.TU.Chr14.461 rna-evm.model.Chr14.461 Chr14 14811527 14817595 uncharacterized protein nan K02186
gene-evm.TU.Chr14.462 rna-evm.model.Chr14.462 Chr14 14855440 14864794 PREDICTED: SNARE-associated protein Snapin GO:0006886;GO:0031083 K20002

For more detailed data, you can explore the Download section to access the full dataset.