CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr14.374 rna-evm.model.Chr14.374 Chr14 11789868 11812534 PREDICTED: Putative helicase mov-10-B.1 GO:0003723;GO:0032574;GO:0035194 K18422
gene-evm.TU.Chr14.376 rna-evm.model.Chr14.376 Chr14 11824018 11826537 PREDICTED: Coagulation factor V nan K16630
gene-evm.TU.Chr14.379 rna-evm.model.Chr14.379 Chr14 11839839 11846186 PREDICTED: Signaling mucin HKR1 nan K05235
gene-evm.TU.Chr14.38 rna-evm.model.Chr14.38 Chr14 1362532 1363528 uncharacterized protein nan nan
gene-evm.TU.Chr14.380 rna-evm.model.Chr14.380 Chr14 11871997 11896955 PREDICTED: Putative helicase mov-10-B.1 GO:0003723;GO:0032574;GO:0035194 K18422
gene-evm.TU.Chr14.381 rna-evm.model.Chr14.381 Chr14 11903225 11909978 PREDICTED: Oligosaccharyltransferase complex subunit ostc nan K26501
gene-evm.TU.Chr14.383 rna-evm.model.Chr14.383 Chr14 11957402 11973562 PREDICTED: Dopamine beta-hydroxylase GO:0004497;GO:0005507;GO:0016715;GO:0055114 K00503
gene-evm.TU.Chr14.386 rna-evm.model.Chr14.386 Chr14 12007871 12028473 PREDICTED: Dopamine beta-hydroxylase GO:0004497;GO:0005507;GO:0016715;GO:0055114 K00503
gene-evm.TU.Chr14.387 rna-evm.model.Chr14.387 Chr14 12053482 12058974 PREDICTED: NACHT, LRR and PYD domains-containing protein 3 nan K12805
gene-evm.TU.Chr14.388 rna-evm.model.Chr14.388 Chr14 12064282 12070449 uncharacterized protein nan K24274

For more detailed data, you can explore the Download section to access the full dataset.