CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr14.326 rna-evm.model.Chr14.326 Chr14 10911461 10912543 PREDICTED: odorant receptor nan K24492
gene-evm.TU.Chr14.330 rna-evm.model.Chr14.330 Chr14 10924571 10927293 uncharacterized protein nan nan
gene-evm.TU.Chr14.331 rna-evm.model.Chr14.331 Chr14 10927391 10928077 PREDICTED: neuroblastoma-amplified sequence nan nan
gene-evm.TU.Chr14.332 rna-evm.model.Chr14.332 Chr14 10931834 10933195 PREDICTED: putative DNA polymerase nan nan
gene-evm.TU.Chr14.333 rna-evm.model.Chr14.333 Chr14 10937612 10938501 PREDICTED: Probable palmitoyltransferase ZDHHC24 nan K18932
gene-evm.TU.Chr14.334 rna-evm.model.Chr14.334 Chr14 10961692 10975848 uncharacterized protein nan K11244
gene-evm.TU.Chr14.335 rna-evm.model.Chr14.335 Chr14 10982634 10994727 PREDICTED: Queuine tRNA-ribosyltransferase catalytic subunit 1 GO:0006400;GO:0016763 K00777
gene-evm.TU.Chr14.336 rna-evm.model.Chr14.336 Chr14 10994858 11005576 PREDICTED: dolichyldiphosphatase [EC:3.6.1.43] nan K07252
gene-evm.TU.Chr14.337 rna-evm.model.Chr14.337 Chr14 11010006 11032669 PREDICTED: 1-deoxypentalenic acid 11-beta-hydroxylase nan K00477
gene-evm.TU.Chr14.338 rna-evm.model.Chr14.338 Chr14 11034510 11035709 PREDICTED: Probable G-protein coupled receptor B0563.6 GO:0004930;GO:0007186;GO:0016020 K05053

For more detailed data, you can explore the Download section to access the full dataset.