CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr14.360 rna-evm.model.Chr14.360 Chr14 11478477 11481463 PREDICTED: P2X purinoceptor 7 nan K05220
gene-evm.TU.Chr14.361 rna-evm.model.Chr14.361 Chr14 11514249 11520689 PREDICTED: exocyst complex component 1 nan K09892
gene-evm.TU.Chr14.366 rna-evm.model.Chr14.366 Chr14 11669983 11671025 PREDICTED: Inositol phosphoceramide mannosyltransferase 1 nan K22721
gene-evm.TU.Chr14.367 rna-evm.model.Chr14.367 Chr14 11684017 11691559 PREDICTED: WD repeat-containing protein 38 GO:0005515 K24745
gene-evm.TU.Chr14.368 rna-evm.model.Chr14.368 Chr14 11698312 11704939 uncharacterized protein nan K06087
gene-evm.TU.Chr14.369 rna-evm.model.Chr14.369 Chr14 11707787 11710938 PREDICTED: Probable calcium-binding protein CML10 GO:0005509 K13448
gene-evm.TU.Chr14.370 rna-evm.model.Chr14.370 Chr14 11713356 11714634 PREDICTED: Glutaredoxin-2, mitochondrial GO:0009055;GO:0015035;GO:0045454 K03676
gene-evm.TU.Chr14.371 rna-evm.model.Chr14.371 Chr14 11718622 11723212 PREDICTED: Probable calcium-binding protein CML10 GO:0005509 K13448
gene-evm.TU.Chr14.372 rna-evm.model.Chr14.372 Chr14 11727439 11773864 PREDICTED: Outer dense fiber protein 2 nan K16479
gene-evm.TU.Chr14.373 rna-evm.model.Chr14.373 Chr14 11779289 11784212 PREDICTED: Torsin-1A-interacting protein 2 nan K23001

For more detailed data, you can explore the Download section to access the full dataset.