CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr14.2210 rna-evm.model.Chr14.2210 Chr14 64896335 64899759 uncharacterized protein nan K16381
gene-evm.TU.Chr14.2211 rna-evm.model.Chr14.2211 Chr14 64919541 64938200 PREDICTED: Hemicentin-1 nan K08631
gene-evm.TU.Chr14.2212 rna-evm.model.Chr14.2212 Chr14 64938340 64939331 PREDICTED: Endonuclease-reverse transcriptase nan K06245
gene-evm.TU.Chr14.2213 rna-evm.model.Chr14.2213 Chr14 64939484 64941091 uncharacterized protein nan nan
gene-evm.TU.Chr14.2218 rna-evm.model.Chr14.2218 Chr14 65126185 65142373 PREDICTED: antigen KI-67 nan K04579
gene-evm.TU.Chr14.2219 rna-evm.model.Chr14.2219 Chr14 65150370 65172367 PREDICTED: MAM and LDL-receptor class A domain-containing protein 1 (Fragment) GO:0016020 K24831
gene-evm.TU.Chr14.222 rna-evm.model.Chr14.222 Chr14 7479226 7492398 PREDICTED: Proteasome subunit beta type-7 GO:0004298;GO:0005839;GO:0051603 K02739
gene-evm.TU.Chr14.2222 rna-evm.model.Chr14.2222 Chr14 65239358 65240455 PREDICTED: protein kinase D [EC:2.7.11.13] nan K17521
gene-evm.TU.Chr14.2224 rna-evm.model.Chr14.2224 Chr14 65308744 65342138 PREDICTED: CD109 antigen GO:0004866;GO:0005615 K06530
gene-evm.TU.Chr14.2225 rna-evm.model.Chr14.2225 Chr14 65715878 65718748 uncharacterized protein nan K06883

For more detailed data, you can explore the Download section to access the full dataset.