CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr14.2195 rna-evm.model.Chr14.2195 Chr14 64361473 64420445 PREDICTED: Adhesive plaque matrix protein nan K20394
gene-evm.TU.Chr14.2199 rna-evm.model.Chr14.2199 Chr14 64495473 64496045 PREDICTED: StAR-related lipid transfer protein 9 nan K09814
gene-evm.TU.Chr14.22 rna-evm.model.Chr14.22 Chr14 577686 584209 PREDICTED: Exodeoxyribonuclease III nan K26238
gene-evm.TU.Chr14.220 rna-evm.model.Chr14.220 Chr14 7436310 7448727 PREDICTED: Dynein heavy chain 10, axonemal nan K10408
gene-evm.TU.Chr14.2201 rna-evm.model.Chr14.2201 Chr14 64566035 64568314 PREDICTED: ankyrin repeat domain-containing protein 50 nan K16381
gene-evm.TU.Chr14.2202 rna-evm.model.Chr14.2202 Chr14 64573507 64574094 PREDICTED: microtubule-associated protein 1 nan K02184
gene-evm.TU.Chr14.2203 rna-evm.model.Chr14.2203 Chr14 64591102 64592523 uncharacterized protein nan nan
gene-evm.TU.Chr14.2205 rna-evm.model.Chr14.2205 Chr14 64693267 64694418 PREDICTED: codanin-1 nan K10746
gene-evm.TU.Chr14.2207 rna-evm.model.Chr14.2207 Chr14 64727169 64737781 PREDICTED: golgin subfamily A member 4 nan K16381
gene-evm.TU.Chr14.221 rna-evm.model.Chr14.221 Chr14 7455644 7468012 PREDICTED: Drebrin-like protein GO:0003779 K20520

For more detailed data, you can explore the Download section to access the full dataset.