CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr14.2160 rna-evm.model.Chr14.2160 Chr14 63421814 63422638 uncharacterized protein nan K24449
gene-evm.TU.Chr14.2161 rna-evm.model.Chr14.2161 Chr14 63422722 63423571 PREDICTED: mRNA-decapping enzyme 1A [EC:3.-.-.-] nan K25669
gene-evm.TU.Chr14.2162 rna-evm.model.Chr14.2162 Chr14 63423610 63425403 PREDICTED: Transposon Ty3-G Gag-Pol polyprotein nan K06245
gene-evm.TU.Chr14.2163 rna-evm.model.Chr14.2163 Chr14 63425478 63426209 PREDICTED: ryanodine receptor 1 nan K04830
gene-evm.TU.Chr14.2167 rna-evm.model.Chr14.2167 Chr14 63667711 63668019 uncharacterized protein nan nan
gene-evm.TU.Chr14.2169 rna-evm.model.Chr14.2169 Chr14 63772491 63775764 PREDICTED: Zinc finger protein 862 nan K24642
gene-evm.TU.Chr14.217 rna-evm.model.Chr14.217 Chr14 7403935 7406843 PREDICTED: Clavaminate synthase-like protein At3g21360 GO:0016491;GO:0055114 K22874
gene-evm.TU.Chr14.2171 rna-evm.model.Chr14.2171 Chr14 63835114 63836228 PREDICTED: Transposable element Tc1 transposase GO:0003677;GO:0006313;GO:0015074 K07494
gene-evm.TU.Chr14.2176 rna-evm.model.Chr14.2176 Chr14 63963007 63965751 uncharacterized protein nan nan
gene-evm.TU.Chr14.2177 rna-evm.model.Chr14.2177 Chr14 63966098 63966454 uncharacterized protein nan nan

For more detailed data, you can explore the Download section to access the full dataset.