CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr14.2137 rna-evm.model.Chr14.2137 Chr14 63044323 63046864 PREDICTED: ATP-dependent DNA helicase hus2/rqh1 GO:0003676;GO:0005524 K03654
gene-evm.TU.Chr14.2138 rna-evm.model.Chr14.2138 Chr14 63058370 63058818 uncharacterized protein nan nan
gene-evm.TU.Chr14.214 rna-evm.model.Chr14.214.1 Chr14 7194686 7204975 PREDICTED: Sulfotransferase family cytosolic 1B member 1 GO:0008146 K22523
gene-evm.TU.Chr14.2140 rna-evm.model.Chr14.2140 Chr14 63063794 63065119 uncharacterized protein nan nan
gene-evm.TU.Chr14.2141 rna-evm.model.Chr14.2141 Chr14 63071336 63072193 PREDICTED: Transmembrane protein C17orf113 nan K10497
gene-evm.TU.Chr14.2142 rna-evm.model.Chr14.2142 Chr14 63072207 63072695 PREDICTED: Zinc finger protein 862 nan K24640
gene-evm.TU.Chr14.2143 rna-evm.model.Chr14.2143 Chr14 63072857 63073252 PREDICTED: NIMA (never in mitosis gene a)-related kinase 1/4/5 [EC:2.7.11.1] nan nan
gene-evm.TU.Chr14.2144 rna-evm.model.Chr14.2144 Chr14 63127559 63128677 uncharacterized protein nan nan
gene-evm.TU.Chr14.2145 rna-evm.model.Chr14.2145 Chr14 63129297 63130385 PREDICTED: striatin 1/3/4 nan K06245
gene-evm.TU.Chr14.2146 rna-evm.model.Chr14.2146 Chr14 63131020 63136112 PREDICTED: Hemicentin-1 nan K16857

For more detailed data, you can explore the Download section to access the full dataset.