CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr14.2108 rna-evm.model.Chr14.2108 Chr14 61990964 62002921 uncharacterized protein nan K02186
gene-evm.TU.Chr14.211 rna-evm.model.Chr14.211 Chr14 7178012 7179597 PREDICTED: TBC1 domain family member 10 nan nan
gene-evm.TU.Chr14.2110 rna-evm.model.Chr14.2110 Chr14 62041536 62094378 PREDICTED: ATP-binding cassette sub-family A member 2 GO:0005524;GO:0016020;GO:0016887;GO:0042626;GO:0055085 K05641
gene-evm.TU.Chr14.2111 rna-evm.model.Chr14.2111 Chr14 62102322 62111999 PREDICTED: Hemicentin-1 nan K06841
gene-evm.TU.Chr14.2112 rna-evm.model.Chr14.2112 Chr14 62121305 62121733 PREDICTED: sentrin-specific protease 1 [EC:3.4.22.68] nan K12671
gene-evm.TU.Chr14.2113 rna-evm.model.Chr14.2113 Chr14 62121773 62121994 uncharacterized protein nan nan
gene-evm.TU.Chr14.2119 rna-evm.model.Chr14.2119 Chr14 62443227 62444573 uncharacterized protein GO:0008270 K07493
gene-evm.TU.Chr14.2121 rna-evm.model.Chr14.2121 Chr14 62450218 62477107 PREDICTED: Protein lifeguard 1 nan K26458
gene-evm.TU.Chr14.2124 rna-evm.model.Chr14.2124 Chr14 62537746 62554967 uncharacterized protein nan K26107
gene-evm.TU.Chr14.2125 rna-evm.model.Chr14.2125 Chr14 62555368 62556375 PREDICTED: exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-] nan K05465

For more detailed data, you can explore the Download section to access the full dataset.