CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr14.2027 rna-evm.model.Chr14.2027 Chr14 59759275 59769868 PREDICTED: Deoxynucleotidyltransferase terminal-interacting protein 2 nan K04853
gene-evm.TU.Chr14.2028 rna-evm.model.Chr14.2028 Chr14 59782738 59782974 uncharacterized protein nan nan
gene-evm.TU.Chr14.2029 rna-evm.model.Chr14.2029 Chr14 59794558 59813617 PREDICTED: Spindle and kinetochore-associated protein 1 GO:0007059;GO:0008017;GO:0051301 K26094
gene-evm.TU.Chr14.203 rna-evm.model.Chr14.203 Chr14 6999515 7001960 PREDICTED: E3 ubiquitin-protein ligase DZIP3 nan K10642
gene-evm.TU.Chr14.2030 rna-evm.model.Chr14.2030 Chr14 59818362 59820462 uncharacterized protein nan K04763
gene-evm.TU.Chr14.2031 rna-evm.model.Chr14.2031 Chr14 59821481 59822233 PREDICTED: organic solute transporter subunit alpha GO:0003676;GO:0008270 K09250
gene-evm.TU.Chr14.2033 rna-evm.model.Chr14.2033 Chr14 59832293 59839646 PREDICTED: ganglioside GM2 activator GO:0006689;GO:0008047 K12383
gene-evm.TU.Chr14.2034 rna-evm.model.Chr14.2034 Chr14 59841829 59887704 PREDICTED: Spindle and kinetochore-associated protein 1 GO:0007059;GO:0008017;GO:0051301 K26094
gene-evm.TU.Chr14.2036 rna-evm.model.Chr14.2036 Chr14 59923124 59958342 PREDICTED: SH2 domain-containing protein 3C GO:0005085;GO:0005515;GO:0007264 K23688
gene-evm.TU.Chr14.2037 rna-evm.model.Chr14.2037 Chr14 59964656 60001905 PREDICTED: Flotillin-1 nan K07192

For more detailed data, you can explore the Download section to access the full dataset.