CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr14.1956_evm.TU.Chr14.1957 rna-evm.model.Chr14.1956_evm.model.Chr14.1957 Chr14 57841954 57865772 PREDICTED: Schlafen-like protein 1 GO:0005524 K18405
gene-evm.TU.Chr14.1958 rna-evm.model.Chr14.1958 Chr14 57906623 57909719 PREDICTED: Caprin-2 nan K24236
gene-evm.TU.Chr14.1959 rna-evm.model.Chr14.1959 Chr14 57910123 57914529 uncharacterized protein nan nan
gene-evm.TU.Chr14.1960 rna-evm.model.Chr14.1960 Chr14 57914722 57915899 PREDICTED: aminopeptidase N [EC:3.4.11.2] nan K12211
gene-evm.TU.Chr14.1965 rna-evm.model.Chr14.1965 Chr14 58102548 58105131 PREDICTED: Uncharacterized protein KIAA1958 nan K24675
gene-evm.TU.Chr14.1967 rna-evm.model.Chr14.1967 Chr14 58115147 58131512 PREDICTED: Lysosomal thioesterase PPT2 GO:0008474;GO:0016790;GO:0098599 K01074
gene-evm.TU.Chr14.1968 rna-evm.model.Chr14.1968 Chr14 58134771 58140296 uncharacterized protein nan K12646
gene-evm.TU.Chr14.1969 rna-evm.model.Chr14.1969 Chr14 58146733 58151047 uncharacterized protein nan K24274
gene-evm.TU.Chr14.197 rna-evm.model.Chr14.197 Chr14 6697015 6755349 PREDICTED: E3 ubiquitin-protein ligase DZIP3 nan K10642
gene-evm.TU.Chr14.1970 rna-evm.model.Chr14.1970 Chr14 58156865 58157380 PREDICTED: exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-] nan K09892

For more detailed data, you can explore the Download section to access the full dataset.