CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr14.1636 rna-evm.model.Chr14.1636 Chr14 50374984 50375894 PREDICTED: Crystallin J1A nan K11687
gene-evm.TU.Chr14.1637 rna-evm.model.Chr14.1637 Chr14 50377556 50379453 PREDICTED: E3 ubiquitin-protein ligase ZSWIM2 nan K19041
gene-evm.TU.Chr14.1638 rna-evm.model.Chr14.1638 Chr14 50380715 50384836 uncharacterized protein nan nan
gene-evm.TU.Chr14.1639 rna-evm.model.Chr14.1639 Chr14 50384902 50391638 PREDICTED: tRNA-splicing endonuclease subunit Sen15 nan K15324
gene-evm.TU.Chr14.1640 rna-evm.model.Chr14.1640 Chr14 50399476 50454414 PREDICTED: Microtubule organization protein AKNA nan K21404
gene-evm.TU.Chr14.1641 rna-evm.model.Chr14.1641 Chr14 50458979 50468003 PREDICTED: Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial GO:0005743;GO:0006744 K18586
gene-evm.TU.Chr14.1642 rna-evm.model.Chr14.1642 Chr14 50467808 50470212 PREDICTED: DNL-type zinc finger protein GO:0008270 K17808
gene-evm.TU.Chr14.1643 rna-evm.model.Chr14.1643.1 Chr14 50471367 50520615 PREDICTED: High affinity copper uptake protein 1 GO:0005375;GO:0016020;GO:0035434 K14686
gene-evm.TU.Chr14.1644 rna-evm.model.Chr14.1644 Chr14 50530097 50580818 PREDICTED: FK506-binding protein 15 GO:0003755 K17478
gene-evm.TU.Chr14.1646 rna-evm.model.Chr14.1646 Chr14 50608142 50608477 uncharacterized protein nan nan

For more detailed data, you can explore the Download section to access the full dataset.