CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr14.1506 rna-evm.model.Chr14.1506 Chr14 46501283 46501591 PREDICTED: Protein GVQW3 nan nan
gene-evm.TU.Chr14.1508 rna-evm.model.Chr14.1508 Chr14 46529119 46545752 PREDICTED: Nose resistant to fluoxetine protein 6 GO:0016747 K16568
gene-evm.TU.Chr14.1509 rna-evm.model.Chr14.1509 Chr14 46555152 46598311 PREDICTED: Nose resistant to fluoxetine protein 6 GO:0016747 K16568
gene-evm.TU.Chr14.151 rna-evm.model.Chr14.151 Chr14 4998869 5041754 PREDICTED: Cubilin nan K14616
gene-evm.TU.Chr14.1510 rna-evm.model.Chr14.1510 Chr14 46608480 46608935 uncharacterized protein nan nan
gene-evm.TU.Chr14.1513 rna-evm.model.Chr14.1513 Chr14 46671880 46691289 PREDICTED: Nose resistant to fluoxetine protein 6 GO:0016747 K16568
gene-evm.TU.Chr14.1514 rna-evm.model.Chr14.1514 Chr14 46691632 46696212 PREDICTED: Peptidase M20 domain-containing protein 2 GO:0016787 K26141
gene-evm.TU.Chr14.1516 rna-evm.model.Chr14.1516 Chr14 46713326 46751193 PREDICTED: Cytosolic phospholipase A2 GO:0004620;GO:0009395 K16342
gene-evm.TU.Chr14.1517 rna-evm.model.Chr14.1517 Chr14 46757724 46757906 PREDICTED: L-xylulose reductase nan K03331
gene-evm.TU.Chr14.1518 rna-evm.model.Chr14.1518 Chr14 46759547 46780764 PREDICTED: Cytosolic phospholipase A2 GO:0004620;GO:0009395 K16342

For more detailed data, you can explore the Download section to access the full dataset.