CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr14.1455 rna-evm.model.Chr14.1455 Chr14 44782681 44792360 uncharacterized protein nan K04846
gene-evm.TU.Chr14.1457 rna-evm.model.Chr14.1457 Chr14 44814961 44815861 uncharacterized protein nan nan
gene-evm.TU.Chr14.1458 rna-evm.model.Chr14.1458 Chr14 44817330 44819610 uncharacterized protein nan nan
gene-evm.TU.Chr14.1459 rna-evm.model.Chr14.1459 Chr14 44822734 44825212 uncharacterized protein nan K25962
gene-evm.TU.Chr14.146 rna-evm.model.Chr14.146 Chr14 4855489 4868894 uncharacterized protein nan K24037
gene-evm.TU.Chr14.1460 rna-evm.model.Chr14.1460 Chr14 44827788 44832110 PREDICTED: 40S ribosomal protein S5 GO:0006412 K02989
gene-evm.TU.Chr14.1462 rna-evm.model.Chr14.1462 Chr14 44866686 44896751 PREDICTED: Procollagen galactosyltransferase 1 nan K11703
gene-evm.TU.Chr14.1464 rna-evm.model.Chr14.1464 Chr14 44969786 44982442 PREDICTED: Carbohydrate sulfotransferase 15 GO:0008146 K08106
gene-evm.TU.Chr14.1466 rna-evm.model.Chr14.1466 Chr14 45001082 45021061 PREDICTED: Beta-1,4-N-acetylgalactosaminyltransferase bre-4 GO:0005975;GO:0016757 K07968
gene-evm.TU.Chr14.1467 rna-evm.model.Chr14.1467 Chr14 45075609 45081751 uncharacterized protein nan K23820

For more detailed data, you can explore the Download section to access the full dataset.