CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr14.144 rna-evm.model.Chr14.144 Chr14 4802236 4813245 PREDICTED: Complement C1q-like protein 4 nan K24236
gene-evm.TU.Chr14.1440 rna-evm.model.Chr14.1440 Chr14 44439583 44446879 uncharacterized protein nan K03098
gene-evm.TU.Chr14.1443 rna-evm.model.Chr14.1443 Chr14 44560277 44565716 PREDICTED: Cytochrome P450 1A5 GO:0005506;GO:0016705;GO:0020037;GO:0055114 K07408
gene-evm.TU.Chr14.1447 rna-evm.model.Chr14.1447 Chr14 44619150 44619503 uncharacterized protein nan nan
gene-evm.TU.Chr14.145 rna-evm.model.Chr14.145 Chr14 4813332 4852933 PREDICTED: Neural proliferation differentiation and control protein 1 GO:0016020 K24958
gene-evm.TU.Chr14.1450 rna-evm.model.Chr14.1450 Chr14 44663175 44664008 uncharacterized protein nan nan
gene-evm.TU.Chr14.1451 rna-evm.model.Chr14.1451 Chr14 44664041 44664978 PREDICTED: Zinc finger MYM-type protein 1 nan K24674
gene-evm.TU.Chr14.1452 rna-evm.model.Chr14.1452 Chr14 44664987 44675670 PREDICTED: 52 kDa repressor of the inhibitor of the protein kinase nan K10497
gene-evm.TU.Chr14.1453 rna-evm.model.Chr14.1453 Chr14 44715620 44717547 PREDICTED: Dopamine N-acetyltransferase nan K22441
gene-evm.TU.Chr14.1454 rna-evm.model.Chr14.1454 Chr14 44725287 44727699 uncharacterized protein nan K00669

For more detailed data, you can explore the Download section to access the full dataset.