CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr14.1406 rna-evm.model.Chr14.1406 Chr14 43579955 43584572 PREDICTED: PHD finger protein ING2 nan K11379
gene-evm.TU.Chr14.1407 rna-evm.model.Chr14.1407 Chr14 43584747 43585548 uncharacterized protein nan K19506
gene-evm.TU.Chr14.1408 rna-evm.model.Chr14.1408 Chr14 43592601 43599854 PREDICTED: Beta-lactamase domain-containing protein 2 nan K01467
gene-evm.TU.Chr14.1410 rna-evm.model.Chr14.1410 Chr14 43608249 43620036 PREDICTED: Beta-lactamase domain-containing protein 2 nan K21469
gene-evm.TU.Chr14.1414 rna-evm.model.Chr14.1414 Chr14 43670700 43680398 PREDICTED: aspartate aminotransferase, mitochondrial [EC:2.6.1.1] nan K25373
gene-evm.TU.Chr14.142 rna-evm.model.Chr14.142 Chr14 4772263 4774426 uncharacterized protein nan K05594
gene-evm.TU.Chr14.1420 rna-evm.model.Chr14.1420 Chr14 43757761 43758099 uncharacterized protein nan K26616
gene-evm.TU.Chr14.1421 rna-evm.model.Chr14.1421 Chr14 43759962 43760327 PREDICTED: THAP domain-containing protein 11 nan K07492
gene-evm.TU.Chr14.1422 rna-evm.model.Chr14.1422 Chr14 43760768 43761124 uncharacterized protein nan K06695
gene-evm.TU.Chr14.1423 rna-evm.model.Chr14.1423 Chr14 43761641 43762093 PREDICTED: inner nuclear membrane protein Man1 nan K21233

For more detailed data, you can explore the Download section to access the full dataset.