CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr1.2038 rna-evm.model.Chr1.2038 Chr1 64565226 64569619 PREDICTED: ganglioside GM2 activator GO:0006689;GO:0008047 K12383
gene-evm.TU.Chr1.2039 rna-evm.model.Chr1.2039 Chr1 64578110 64598305 PREDICTED: ganglioside GM2 activator GO:0006689;GO:0008047 K12383
gene-evm.TU.Chr1.204 rna-evm.model.Chr1.204 Chr1 6333501 6333782 PREDICTED: Rho-associated protein kinase 2 [EC:2.7.11.1] nan nan
gene-evm.TU.Chr1.2041 rna-evm.model.Chr1.2041 Chr1 64638038 64685000 PREDICTED: Ganglioside GM2 activator GO:0006689;GO:0008047 K12383
gene-evm.TU.Chr1.2042 rna-evm.model.Chr1.2042 Chr1 64691135 64697174 PREDICTED: ganglioside GM2 activator GO:0006689;GO:0008047 K12383
gene-evm.TU.Chr1.2043 rna-evm.model.Chr1.2043 Chr1 64702171 64711916 PREDICTED: Ganglioside GM2 activator GO:0006689;GO:0008047 K12383
gene-evm.TU.Chr1.2044 rna-evm.model.Chr1.2044 Chr1 64715268 64719347 PREDICTED: Ganglioside GM2 activator GO:0006689;GO:0008047 K12383
gene-evm.TU.Chr1.2045 rna-evm.model.Chr1.2045 Chr1 64724716 64728515 PREDICTED: Ganglioside GM2 activator GO:0006689;GO:0008047 K12383
gene-evm.TU.Chr1.2046 rna-evm.model.Chr1.2046 Chr1 64728699 64751776 PREDICTED: Ganglioside GM2 activator GO:0006689;GO:0008047 K12383
gene-evm.TU.Chr1.2047 rna-evm.model.Chr1.2047 Chr1 64765357 64767670 PREDICTED: Ganglioside GM2 activator GO:0006689;GO:0008047 K12383

For more detailed data, you can explore the Download section to access the full dataset.