CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr14.1209 rna-evm.model.Chr14.1209 Chr14 37416586 37417796 uncharacterized protein nan K21998
gene-evm.TU.Chr14.121 rna-evm.model.Chr14.121 Chr14 3852580 3856820 PREDICTED: proprotein convertase subtilisin/kexin type 5 [EC:3.4.21.-] nan K08654
gene-evm.TU.Chr14.1210 rna-evm.model.Chr14.1210 Chr14 37427976 37429649 uncharacterized protein nan K14723
gene-evm.TU.Chr14.1211 rna-evm.model.Chr14.1211 Chr14 37433370 37434087 uncharacterized protein nan nan
gene-evm.TU.Chr14.1213_evm.TU.Chr14.1214 rna-evm.model.Chr14.1213_evm.model.Chr14.1214 Chr14 37444146 37472448 PREDICTED: Integrator complex subunit 5 GO:0032039 K13142
gene-evm.TU.Chr14.1215 rna-evm.model.Chr14.1215 Chr14 37477378 37517958 PREDICTED: Tubulin polyglutamylase TTLL11 GO:0036211 K16604
gene-evm.TU.Chr14.1216 rna-evm.model.Chr14.1216 Chr14 37525859 37567222 PREDICTED: a disintegrin and metalloproteinase with thrombospondin motifs 10 [EC:3.4.24.-] nan K18637
gene-evm.TU.Chr14.1218 rna-evm.model.Chr14.1218 Chr14 37677031 37677288 uncharacterized protein nan nan
gene-evm.TU.Chr14.1219 rna-evm.model.Chr14.1219 Chr14 37677935 37678697 PREDICTED: solute carrier family 44 (choline transporter-like protein), member 2/4/5 nan K26653
gene-evm.TU.Chr14.122 rna-evm.model.Chr14.122 Chr14 3856947 3862512 PREDICTED: proprotein convertase subtilisin/kexin type 5 [EC:3.4.21.-] nan K08654

For more detailed data, you can explore the Download section to access the full dataset.