CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr14.1199 rna-evm.model.Chr14.1199 Chr14 37304027 37304857 PREDICTED: mannose receptor, C type nan K06468
gene-evm.TU.Chr14.120 rna-evm.model.Chr14.120 Chr14 3755212 3845990 PREDICTED: Low-density lipoprotein receptor-related protein 4 nan K20051
gene-evm.TU.Chr14.1200 rna-evm.model.Chr14.1200 Chr14 37310223 37317242 PREDICTED: CD209 antigen-like protein 2 nan K06468
gene-evm.TU.Chr14.1201 rna-evm.model.Chr14.1201 Chr14 37317757 37318074 PREDICTED: LINE-1 retrotransposable element ORF2 protein nan K26653
gene-evm.TU.Chr14.1202 rna-evm.model.Chr14.1202 Chr14 37318333 37319232 uncharacterized protein nan K18440
gene-evm.TU.Chr14.1203 rna-evm.model.Chr14.1203 Chr14 37319332 37319952 uncharacterized protein nan nan
gene-evm.TU.Chr14.1204 rna-evm.model.Chr14.1204 Chr14 37320016 37320447 PREDICTED: protein kinase D [EC:2.7.11.13] nan nan
gene-evm.TU.Chr14.1206 rna-evm.model.Chr14.1206 Chr14 37322382 37388387 PREDICTED: Protein Star nan K21402
gene-evm.TU.Chr14.1207 rna-evm.model.Chr14.1207 Chr14 37389626 37402050 uncharacterized protein nan nan
gene-evm.TU.Chr14.1208 rna-evm.model.Chr14.1208 Chr14 37405898 37411270 uncharacterized protein nan K22737

For more detailed data, you can explore the Download section to access the full dataset.