CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr14.1180 rna-evm.model.Chr14.1180 Chr14 36980486 36986269 PREDICTED: Uncharacterized protein C1orf53 nan nan
gene-evm.TU.Chr14.1181 rna-evm.model.Chr14.1181.1 Chr14 36990075 37043415 PREDICTED: DENN domain-containing protein 1B GO:0005085 K20160
gene-evm.TU.Chr14.1182 rna-evm.model.Chr14.1182 Chr14 37052976 37068141 PREDICTED: Protein Star nan K16381
gene-evm.TU.Chr14.1183 rna-evm.model.Chr14.1183 Chr14 37080858 37081411 uncharacterized protein nan K13790
gene-evm.TU.Chr14.1184 rna-evm.model.Chr14.1184 Chr14 37093334 37100259 uncharacterized protein nan nan
gene-evm.TU.Chr14.1185 rna-evm.model.Chr14.1185 Chr14 37151024 37151873 PREDICTED: cytochrome P450 family 1 subfamily A polypeptide 1 [EC:1.14.14.1] nan K07410
gene-evm.TU.Chr14.1186 rna-evm.model.Chr14.1186 Chr14 37154742 37155818 uncharacterized protein nan K13790
gene-evm.TU.Chr14.1187 rna-evm.model.Chr14.1187 Chr14 37160026 37160806 uncharacterized protein nan K13790
gene-evm.TU.Chr14.1188 rna-evm.model.Chr14.1188 Chr14 37164112 37180520 PREDICTED: Zinc finger MYND domain-containing protein 19 nan K24632
gene-evm.TU.Chr14.1189 rna-evm.model.Chr14.1189 Chr14 37191636 37204718 PREDICTED: 1-deoxypentalenic acid 11-beta-hydroxylase nan K00477

For more detailed data, you can explore the Download section to access the full dataset.