CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr14.1126 rna-evm.model.Chr14.1126 Chr14 35818030 35825445 uncharacterized protein nan nan
gene-evm.TU.Chr14.1127 rna-evm.model.Chr14.1127 Chr14 35829558 35829848 uncharacterized protein nan nan
gene-evm.TU.Chr14.1128 rna-evm.model.Chr14.1128 Chr14 35829892 35830443 PREDICTED: solute carrier family 15, member 5 nan K07497
gene-evm.TU.Chr14.1129 rna-evm.model.Chr14.1129 Chr14 35834273 35874753 PREDICTED: Collagen alpha-1(XXVII) chain B GO:0005201 K19721
gene-evm.TU.Chr14.1130 rna-evm.model.Chr14.1130 Chr14 35878002 35881319 PREDICTED: Carbohydrate sulfotransferase 13 GO:0008146;GO:0016020;GO:0016051 K01017
gene-evm.TU.Chr14.1131 rna-evm.model.Chr14.1131 Chr14 35888167 35888903 uncharacterized protein nan nan
gene-evm.TU.Chr14.1132 rna-evm.model.Chr14.1132 Chr14 35889311 35890117 PREDICTED: Protein P nan K21037
gene-evm.TU.Chr14.1133 rna-evm.model.Chr14.1133 Chr14 35890517 35890756 PREDICTED: myotubularin-related protein 10/11/12 nan nan
gene-evm.TU.Chr14.1134 rna-evm.model.Chr14.1134 Chr14 35891074 35891616 PREDICTED: Integrase/recombinase xerD homolog GO:0003677;GO:0006310;GO:0015074 K04763
gene-evm.TU.Chr14.1135 rna-evm.model.Chr14.1135 Chr14 35900442 35906590 PREDICTED: Protein ABHD14B nan K13706

For more detailed data, you can explore the Download section to access the full dataset.