CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr14.1071 rna-evm.model.Chr14.1071 Chr14 34249227 34290737 PREDICTED: Xenotropic and polytropic retrovirus receptor 1 GO:0016020 K24195
gene-evm.TU.Chr14.1074 rna-evm.model.Chr14.1074 Chr14 34306766 34313113 PREDICTED: Histone-lysine N-methyltransferase SETMAR nan K04763
gene-evm.TU.Chr14.1075 rna-evm.model.Chr14.1075 Chr14 34313204 34313569 uncharacterized protein nan K21754
gene-evm.TU.Chr14.1078_evm.TU.Chr14.1072 rna-evm.model.Chr14.1078_evm.model.Chr14.1072 Chr14 34294085 34344741 PREDICTED: Uncharacterized protein C1orf112 nan K00116
gene-evm.TU.Chr14.1079 rna-evm.model.Chr14.1079 Chr14 34340830 34349271 uncharacterized protein nan nan
gene-evm.TU.Chr14.108 rna-evm.model.Chr14.108 Chr14 3552840 3553307 PREDICTED: CD109 antigen nan nan
gene-evm.TU.Chr14.1080 rna-evm.model.Chr14.1080 Chr14 34363556 34366356 uncharacterized protein nan nan
gene-evm.TU.Chr14.1081 rna-evm.model.Chr14.1081 Chr14 34380732 34382407 PREDICTED: ankyrin repeat domain-containing protein 17 nan K04337
gene-evm.TU.Chr14.1083 rna-evm.model.Chr14.1083 Chr14 34493529 34500736 PREDICTED: BarH-like 1 homeobox protein GO:0003677 K09360
gene-evm.TU.Chr14.1084 rna-evm.model.Chr14.1084 Chr14 34544225 34563437 PREDICTED: BarH-like 1 homeobox protein GO:0003677 K09360

For more detailed data, you can explore the Download section to access the full dataset.