CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr14.1085 rna-evm.model.Chr14.1085 Chr14 34567958 34590832 PREDICTED: DBH-like monooxygenase protein 2 GO:0004497;GO:0005507;GO:0016715;GO:0055114 K00503
gene-evm.TU.Chr14.1086 rna-evm.model.Chr14.1086 Chr14 34591716 34617543 PREDICTED: Carbohydrate sulfotransferase 15 GO:0008146 K08106
gene-evm.TU.Chr14.1088 rna-evm.model.Chr14.1088 Chr14 34635213 34650912 uncharacterized protein nan nan
gene-evm.TU.Chr14.109 rna-evm.model.Chr14.109 Chr14 3566561 3581642 PREDICTED: aquaporin rerated protein, invertebrate GO:0003676 nan
gene-evm.TU.Chr14.1091 rna-evm.model.Chr14.1091 Chr14 34768671 34789848 uncharacterized protein nan nan
gene-evm.TU.Chr14.1092 rna-evm.model.Chr14.1092 Chr14 34809498 34826255 uncharacterized protein nan nan
gene-evm.TU.Chr14.1095 rna-evm.model.Chr14.1095 Chr14 34877948 34883202 PREDICTED: Protein mab-21 nan K23092
gene-evm.TU.Chr14.1097 rna-evm.model.Chr14.1097 Chr14 34948670 34956880 PREDICTED: Hemicentin-2 nan K16680
gene-evm.TU.Chr14.1098 rna-evm.model.Chr14.1098 Chr14 34966199 35091174 PREDICTED: Roundabout homolog 1 nan K05093
gene-evm.TU.Chr14.1099 rna-evm.model.Chr14.1099 Chr14 35101761 35105545 uncharacterized protein nan K03789

For more detailed data, you can explore the Download section to access the full dataset.