CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr14.1016 rna-evm.model.Chr14.1016 Chr14 32638201 32643190 uncharacterized protein nan nan
gene-evm.TU.Chr14.102 rna-evm.model.Chr14.102 Chr14 3426695 3428736 PREDICTED: Partner of xrn-2 protein 1 nan K26458
gene-evm.TU.Chr14.1020 rna-evm.model.Chr14.1020 Chr14 32911410 32923588 PREDICTED: Baculoviral IAP repeat-containing protein 7-A nan K04725
gene-evm.TU.Chr14.1024 rna-evm.model.Chr14.1024 Chr14 32974049 32984146 uncharacterized protein nan nan
gene-evm.TU.Chr14.1025 rna-evm.model.Chr14.1025 Chr14 32996877 33000327 PREDICTED: Ikaros family zinc finger protein GO:0003676 K09214
gene-evm.TU.Chr14.1027 rna-evm.model.Chr14.1027 Chr14 33020711 33044805 PREDICTED: Dual specificity mitogen-activated protein kinase kinase 7 GO:0004672;GO:0005524;GO:0006468 K04431
gene-evm.TU.Chr14.1028 rna-evm.model.Chr14.1028 Chr14 33048532 33050037 PREDICTED: Cytochrome P450 1A2 GO:0005506;GO:0016705;GO:0020037;GO:0055114 K07408
gene-evm.TU.Chr14.1029 rna-evm.model.Chr14.1029 Chr14 33052375 33065530 PREDICTED: Kinesin-associated protein 3 GO:0005871;GO:0019894 K25388
gene-evm.TU.Chr14.103 rna-evm.model.Chr14.103.2 Chr14 3437921 3478360 uncharacterized protein nan nan
gene-evm.TU.Chr14.1030 rna-evm.model.Chr14.1030 Chr14 33065866 33080019 PREDICTED: Kinesin-associated protein 3 GO:0005515;GO:0005871;GO:0019894 K25388

For more detailed data, you can explore the Download section to access the full dataset.