CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr13.983 rna-evm.model.Chr13.983 Chr13 28802768 28806116 PREDICTED: 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 nan K22928
gene-evm.TU.Chr13.984 rna-evm.model.Chr13.984 Chr13 28811292 28818270 PREDICTED: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 1 nan K03945
gene-evm.TU.Chr13.985 rna-evm.model.Chr13.985 Chr13 28825602 28833985 PREDICTED: Carbohydrate sulfotransferase 15 nan K08106
gene-evm.TU.Chr13.986 rna-evm.model.Chr13.986.1 Chr13 28862769 28877036 uncharacterized protein nan K07070
gene-evm.TU.Chr13.988 rna-evm.model.Chr13.988 Chr13 28960191 28963124 PREDICTED: neuronal calcium sensor 1 GO:0005509 K23901
gene-evm.TU.Chr13.989 rna-evm.model.Chr13.989 Chr13 28980265 29042984 PREDICTED: Probable ubiquitin carboxyl-terminal hydrolase FAF-X GO:0016579;GO:0004843 K11840
gene-evm.TU.Chr13.990 rna-evm.model.Chr13.990 Chr13 29045467 29072836 PREDICTED: Transmembrane 9 superfamily member 2 GO:0016020 K17086
gene-evm.TU.Chr13.991 rna-evm.model.Chr13.991 Chr13 29075472 29081925 uncharacterized protein GO:0005515 K24057
gene-evm.TU.Chr13.992 rna-evm.model.Chr13.992 Chr13 29084371 29085055 uncharacterized protein nan nan
gene-evm.TU.Chr13.993 rna-evm.model.Chr13.993 Chr13 29092527 29100523 uncharacterized protein nan nan

For more detailed data, you can explore the Download section to access the full dataset.