CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr13.70 rna-evm.model.Chr13.70 Chr13 2098367 2106553 PREDICTED: Discoidin domain-containing receptor 2 nan K05125
gene-evm.TU.Chr13.701 rna-evm.model.Chr13.701 Chr13 20333269 20336234 uncharacterized protein nan nan
gene-evm.TU.Chr13.705 rna-evm.model.Chr13.705 Chr13 20446664 20456258 PREDICTED: Baculoviral IAP repeat-containing protein 2 nan K16060
gene-evm.TU.Chr13.706 rna-evm.model.Chr13.706 Chr13 20467895 20473975 PREDICTED: DNA polymerase III PolC-type nan K02342
gene-evm.TU.Chr13.707 rna-evm.model.Chr13.707 Chr13 20474682 20475046 uncharacterized protein nan K11672
gene-evm.TU.Chr13.708 rna-evm.model.Chr13.708 Chr13 20498692 20506531 PREDICTED: tumor necrosis factor receptor superfamily member 10A/B GO:0005515 K03158
gene-evm.TU.Chr13.709 rna-evm.model.Chr13.709 Chr13 20510393 20514463 PREDICTED: probable cyclin-dependent serine/threonine-protein kinase DDB_G0292550, partial GO:0005515;GO:0007165 K18637
gene-evm.TU.Chr13.71 rna-evm.model.Chr13.71 Chr13 2126764 2127424 uncharacterized protein nan nan
gene-evm.TU.Chr13.710 rna-evm.model.Chr13.710 Chr13 20526140 20526668 uncharacterized protein nan nan
gene-evm.TU.Chr13.711 rna-evm.model.Chr13.711 Chr13 20532266 20533774 uncharacterized protein nan K07114

For more detailed data, you can explore the Download section to access the full dataset.