CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr13.634 rna-evm.model.Chr13.634 Chr13 18249722 18257726 uncharacterized protein nan K09643
gene-evm.TU.Chr13.635 rna-evm.model.Chr13.635 Chr13 18261510 18262343 PREDICTED: Arylsulfatase B GO:0008484 K01135
gene-evm.TU.Chr13.636 rna-evm.model.Chr13.636 Chr13 18262529 18265203 PREDICTED: Arylsulfatase B GO:0008484 K01135
gene-evm.TU.Chr13.637 rna-evm.model.Chr13.637 Chr13 18269841 18271004 PREDICTED: Arylsulfatase B GO:0008484 K01135
gene-evm.TU.Chr13.638 rna-evm.model.Chr13.638 Chr13 18271023 18271448 PREDICTED: Arylsulfatase I GO:0008484 K01135
gene-evm.TU.Chr13.639 rna-evm.model.Chr13.639 Chr13 18277375 18279237 PREDICTED: Arylsulfatase B GO:0008484 K01135
gene-evm.TU.Chr13.640 rna-evm.model.Chr13.640 Chr13 18282907 18290508 PREDICTED: Pseudouridine-5'-phosphatase nan K17623
gene-evm.TU.Chr13.641 rna-evm.model.Chr13.641 Chr13 18295500 18297765 uncharacterized protein nan K24133
gene-evm.TU.Chr13.642 rna-evm.model.Chr13.642 Chr13 18297991 18304779 PREDICTED: Kyphoscoliosis peptidase nan K24456
gene-evm.TU.Chr13.643 rna-evm.model.Chr13.643 Chr13 18307477 18318965 PREDICTED: Kyphoscoliosis peptidase nan K24456

For more detailed data, you can explore the Download section to access the full dataset.