CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr1.1962 rna-evm.model.Chr1.1962 Chr1 62609585 62646280 PREDICTED: Multidrug resistance-associated protein 5 GO:0005515;GO:0005524;GO:0016020;GO:0016887;GO:0042626;GO:0055085 K05668
gene-evm.TU.Chr1.1964 rna-evm.model.Chr1.1964 Chr1 62652461 62680324 uncharacterized protein nan K20479
gene-evm.TU.Chr1.1966 rna-evm.model.Chr1.1966 Chr1 62685174 62691971 PREDICTED: Cytochrome P450 2J2 GO:0005506;GO:0016705;GO:0020037;GO:0055114 K07418
gene-evm.TU.Chr1.1967 rna-evm.model.Chr1.1967 Chr1 62694622 62701731 PREDICTED: Cytochrome P450 2U1 GO:0005506;GO:0016705;GO:0020037;GO:0055114 K07418
gene-evm.TU.Chr1.1968 rna-evm.model.Chr1.1968 Chr1 62702597 62702983 uncharacterized protein nan nan
gene-evm.TU.Chr1.1969 rna-evm.model.Chr1.1969 Chr1 62706235 62711249 PREDICTED: Hillarin nan K24456
gene-evm.TU.Chr1.197 rna-evm.model.Chr1.197 Chr1 6096378 6103495 PREDICTED: Heat shock 70 kDa protein 12B nan K04043
gene-evm.TU.Chr1.1970 rna-evm.model.Chr1.1970 Chr1 62722960 62731649 PREDICTED: Macrophage mannose receptor 1 nan K06560
gene-evm.TU.Chr1.1971 rna-evm.model.Chr1.1971 Chr1 62732504 62737979 uncharacterized protein nan nan
gene-evm.TU.Chr1.1972 rna-evm.model.Chr1.1972 Chr1 62743891 62781678 PREDICTED: Macrophage mannose receptor 1 nan K06560

For more detailed data, you can explore the Download section to access the full dataset.