CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr1.1900 rna-evm.model.Chr1.1900 Chr1 60430155 60432004 PREDICTED: Mariner Mos1 transposase nan nan
gene-evm.TU.Chr1.1902_evm.TU.Chr1.1903 rna-evm.model.Chr1.1902_evm.model.Chr1.1903 Chr1 60459596 60501750 PREDICTED: Dachshund homolog 1 nan K26259
gene-evm.TU.Chr1.1904 rna-evm.model.Chr1.1904 Chr1 60674259 60684370 uncharacterized protein nan nan
gene-evm.TU.Chr1.1905 rna-evm.model.Chr1.1905 Chr1 60689859 60702767 PREDICTED: Neuronal membrane glycoprotein M6-b GO:0016020 K17271
gene-evm.TU.Chr1.1908 rna-evm.model.Chr1.1908 Chr1 60744072 60785234 PREDICTED: Hemicentin-1 nan K17531
gene-evm.TU.Chr1.1909 rna-evm.model.Chr1.1909 Chr1 60789074 60810475 PREDICTED: Netrin receptor DCC GO:0005515 K06766
gene-evm.TU.Chr1.191 rna-evm.model.Chr1.191 Chr1 6034606 6037762 PREDICTED: Heat shock 70 kDa protein 12A nan K04043
gene-evm.TU.Chr1.1910 rna-evm.model.Chr1.1910 Chr1 60813887 60828375 PREDICTED: Serine/threonine-protein kinase DCLK1 GO:0004672;GO:0005524;GO:0006468 K08805
gene-evm.TU.Chr1.1911 rna-evm.model.Chr1.1911 Chr1 60886336 60896940 PREDICTED: Neuronal migration protein doublecortin GO:0035556 K16579
gene-evm.TU.Chr1.1912 rna-evm.model.Chr1.1912 Chr1 60918767 60974749 PREDICTED: MAX gene-associated protein nan K23399

For more detailed data, you can explore the Download section to access the full dataset.