CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr13.274 rna-evm.model.Chr13.274 Chr13 7567428 7573441 PREDICTED: Potassium voltage-gated channel subfamily D member 1 GO:0005216;GO:0005249;GO:0005515;GO:0006811;GO:0006813;GO:0008076;GO:0016020;GO:0051260;GO:0055085 K04887
gene-evm.TU.Chr13.275 rna-evm.model.Chr13.275 Chr13 7574707 7577583 PREDICTED: Caprin-2 nan K23284
gene-evm.TU.Chr13.276 rna-evm.model.Chr13.276 Chr13 7582993 7583514 PREDICTED: Mid1-interacting protein 1A nan nan
gene-evm.TU.Chr13.277 rna-evm.model.Chr13.277 Chr13 7583754 7585441 uncharacterized protein nan nan
gene-evm.TU.Chr13.278 rna-evm.model.Chr13.278 Chr13 7585561 7587309 PREDICTED: Electron transfer flavoprotein beta subunit lysine methyltransferase nan K22843
gene-evm.TU.Chr13.279 rna-evm.model.Chr13.279 Chr13 7590851 7596308 uncharacterized protein nan nan
gene-evm.TU.Chr13.28 rna-evm.model.Chr13.28 Chr13 678524 681850 PREDICTED: Protein NATD1 nan K06975
gene-evm.TU.Chr13.281 rna-evm.model.Chr13.281 Chr13 7605669 7607635 PREDICTED: Ankyrin repeat domain-containing protein 63 GO:0005515 K06867
gene-evm.TU.Chr13.282 rna-evm.model.Chr13.282 Chr13 7613108 7682592 PREDICTED: Low-density lipoprotein receptor-related protein 6 nan K20051
gene-evm.TU.Chr13.283 rna-evm.model.Chr13.283 Chr13 7723979 7725781 uncharacterized protein nan nan

For more detailed data, you can explore the Download section to access the full dataset.