CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr13.2069 rna-evm.model.Chr13.2069 Chr13 61314980 61316782 PREDICTED: Sex peptide receptor GO:0004930;GO:0007186;GO:0016020 K26200
gene-evm.TU.Chr13.207 rna-evm.model.Chr13.207 Chr13 5633061 5641495 PREDICTED: Hemicentin-1 nan K07521
gene-evm.TU.Chr13.2070 rna-evm.model.Chr13.2070 Chr13 61320495 61322427 PREDICTED: Sex peptide receptor GO:0004930;GO:0007186;GO:0016020 K26200
gene-evm.TU.Chr13.2071 rna-evm.model.Chr13.2071 Chr13 61325983 61327472 PREDICTED: Sex peptide receptor GO:0004930;GO:0007186;GO:0016020 K26200
gene-evm.TU.Chr13.2072 rna-evm.model.Chr13.2072 Chr13 61332399 61351528 PREDICTED: Monocarboxylate transporter 9 GO:0016020;GO:0055085 K08190
gene-evm.TU.Chr13.2077 rna-evm.model.Chr13.2077 Chr13 61500705 61501946 PREDICTED: Uncharacterized protein PFD1115c nan K06674
gene-evm.TU.Chr13.2079 rna-evm.model.Chr13.2079 Chr13 61536870 61543766 PREDICTED: Monocarboxylate transporter 14 GO:0016020;GO:0055085 K08190
gene-evm.TU.Chr13.208 rna-evm.model.Chr13.208 Chr13 5654327 5658203 PREDICTED: FMRFamide receptor GO:0004930;GO:0007186;GO:0016020 K04284
gene-evm.TU.Chr13.2080 rna-evm.model.Chr13.2080 Chr13 61561698 61598204 PREDICTED: Deoxyribodipyrimidine photo-lyase nan K01669
gene-evm.TU.Chr13.2081 rna-evm.model.Chr13.2081.2 Chr13 61608523 61647856 PREDICTED: Ankyrin repeat and MYND domain-containing protein 1 GO:0005515 K24631

For more detailed data, you can explore the Download section to access the full dataset.