CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr13.1957 rna-evm.model.Chr13.1957 Chr13 57413184 57414345 PREDICTED: FMRFamide receptor GO:0004930;GO:0007186;GO:0016020 K04284
gene-evm.TU.Chr13.1958 rna-evm.model.Chr13.1958 Chr13 57459523 57460626 PREDICTED: FMRFamide receptor GO:0004930;GO:0007186;GO:0016020 K04284
gene-evm.TU.Chr13.1959 rna-evm.model.Chr13.1959 Chr13 57473061 57473927 PREDICTED: striatin 1/3/4 nan K23729
gene-evm.TU.Chr13.196 rna-evm.model.Chr13.196 Chr13 5415200 5417914 PREDICTED: protein unc-13 A/B/C nan K10306
gene-evm.TU.Chr13.1961 rna-evm.model.Chr13.1961 Chr13 57815406 57816566 PREDICTED: FMRFamide receptor GO:0004930;GO:0007186;GO:0016020 K04284
gene-evm.TU.Chr13.1962 rna-evm.model.Chr13.1962 Chr13 57930201 57949110 PREDICTED: N-lysine methyltransferase KMT5A GO:0005515 K11428
gene-evm.TU.Chr13.1963 rna-evm.model.Chr13.1963 Chr13 57988681 57989575 PREDICTED: disintegrin and metalloproteinase domain-containing protein 12 [EC:3.4.24.-] nan K13564
gene-evm.TU.Chr13.1964 rna-evm.model.Chr13.1964 Chr13 57989775 57991144 uncharacterized protein nan nan
gene-evm.TU.Chr13.1965 rna-evm.model.Chr13.1965 Chr13 57999086 58016587 uncharacterized protein nan nan
gene-evm.TU.Chr13.1966 rna-evm.model.Chr13.1966 Chr13 58036501 58037676 PREDICTED: polycystin 1L2 nan nan

For more detailed data, you can explore the Download section to access the full dataset.