CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr13.1884 rna-evm.model.Chr13.1884 Chr13 56153114 56155664 PREDICTED: ATP-dependent DNA helicase RecQ nan K03654
gene-evm.TU.Chr13.1886 rna-evm.model.Chr13.1886.1 Chr13 56179914 56205555 uncharacterized protein nan K06946
gene-evm.TU.Chr13.1888 rna-evm.model.Chr13.1888 Chr13 56201293 56201610 uncharacterized protein nan K12023
gene-evm.TU.Chr13.1889 rna-evm.model.Chr13.1889 Chr13 56201911 56202405 PREDICTED: kelch-like protein 2/3 GO:0046983 K24674
gene-evm.TU.Chr13.1890 rna-evm.model.Chr13.1890 Chr13 56203174 56209269 uncharacterized protein nan K23316
gene-evm.TU.Chr13.1891 rna-evm.model.Chr13.1891 Chr13 56210806 56214953 PREDICTED: histone-lysine N-methyltransferase SETMAR [EC:2.1.1.43] nan nan
gene-evm.TU.Chr13.1892 rna-evm.model.Chr13.1892 Chr13 56214978 56215414 PREDICTED: Mariner Mos1 transposase nan K07694
gene-evm.TU.Chr13.1893 rna-evm.model.Chr13.1893 Chr13 56268400 56271383 uncharacterized protein nan K03377
gene-evm.TU.Chr13.1895 rna-evm.model.Chr13.1895 Chr13 56284679 56288940 PREDICTED: collagen, type V/XI/XXIV/XXVII, alpha nan K10306
gene-evm.TU.Chr13.1897 rna-evm.model.Chr13.1897 Chr13 56307549 56314379 uncharacterized protein nan K06786

For more detailed data, you can explore the Download section to access the full dataset.