CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr13.1852 rna-evm.model.Chr13.1852 Chr13 55448339 55450510 uncharacterized protein nan K21864
gene-evm.TU.Chr13.1853 rna-evm.model.Chr13.1853 Chr13 55450771 55472616 uncharacterized protein nan K10541
gene-evm.TU.Chr13.1855 rna-evm.model.Chr13.1855 Chr13 55504322 55530501 PREDICTED: Heat shock 70 kDa protein 12B nan K04043
gene-evm.TU.Chr13.1856 rna-evm.model.Chr13.1856 Chr13 55530870 55531571 uncharacterized protein nan K17592
gene-evm.TU.Chr13.1857 rna-evm.model.Chr13.1857 Chr13 55545345 55552018 PREDICTED: Thioredoxin reductase-like selenoprotein T1b nan K22366
gene-evm.TU.Chr13.1858 rna-evm.model.Chr13.1858 Chr13 55557402 55569431 PREDICTED: Replication factor C subunit 4 GO:0005524 K10755
gene-evm.TU.Chr13.1859 rna-evm.model.Chr13.1859 Chr13 55576162 55577238 PREDICTED: tripartite motif-containing protein 56 [EC:2.3.2.27] nan K11997
gene-evm.TU.Chr13.186 rna-evm.model.Chr13.186 Chr13 5306081 5308426 PREDICTED: golgin subfamily B member 1 nan K11499
gene-evm.TU.Chr13.1860 rna-evm.model.Chr13.1860 Chr13 55581134 55599746 PREDICTED: General transcription factor IIF subunit 2 GO:0005674;GO:0006366;GO:0006367 K03139
gene-evm.TU.Chr13.1861 rna-evm.model.Chr13.1861 Chr13 55637173 55645122 PREDICTED: General transcription factor IIF subunit 2 GO:0005674;GO:0006366;GO:0006367 K03139

For more detailed data, you can explore the Download section to access the full dataset.