CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr13.1750 rna-evm.model.Chr13.1750 Chr13 52534315 52535058 PREDICTED: Tenascin-X nan K24318
gene-evm.TU.Chr13.1751 rna-evm.model.Chr13.1751 Chr13 52551962 52552749 uncharacterized protein nan nan
gene-evm.TU.Chr13.1752 rna-evm.model.Chr13.1752 Chr13 52602845 52604236 uncharacterized protein nan K02109
gene-evm.TU.Chr13.1753 rna-evm.model.Chr13.1753 Chr13 52764241 52766302 PREDICTED: solute carrier family 15, member 5 nan nan
gene-evm.TU.Chr13.1756 rna-evm.model.Chr13.1756 Chr13 52830034 52831290 PREDICTED: Heat shock 70 kDa protein 12B nan K04043
gene-evm.TU.Chr13.1757 rna-evm.model.Chr13.1757 Chr13 52832052 52836478 PREDICTED: Heat shock 70 kDa protein 12B nan K04043
gene-evm.TU.Chr13.1759 rna-evm.model.Chr13.1759 Chr13 52845903 52852420 PREDICTED: Heat shock 70 kDa protein 12B nan K04043
gene-evm.TU.Chr13.1760 rna-evm.model.Chr13.1760 Chr13 52869348 52873405 PREDICTED: E1A/CREB-binding protein [EC:2.3.1.48] nan K03105
gene-evm.TU.Chr13.1762 rna-evm.model.Chr13.1762 Chr13 52925743 52926678 PREDICTED: coatomer subunit beta' nan K08757
gene-evm.TU.Chr13.1764 rna-evm.model.Chr13.1764 Chr13 52947653 52977135 PREDICTED: pogo transposable element with ZNF domain nan nan

For more detailed data, you can explore the Download section to access the full dataset.