CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr13.1712 rna-evm.model.Chr13.1712 Chr13 51422093 51459032 PREDICTED: N-acetylglucosamine-1-phosphotransferase subunits alpha/beta GO:0016772 K08239
gene-evm.TU.Chr13.1713 rna-evm.model.Chr13.1713 Chr13 51500149 51500919 PREDICTED: Adhesion G protein-coupled receptor E2 nan K04599
gene-evm.TU.Chr13.1715 rna-evm.model.Chr13.1715 Chr13 51507303 51509904 PREDICTED: P2X purinoceptor 7 nan K05220
gene-evm.TU.Chr13.1716 rna-evm.model.Chr13.1716 Chr13 51514456 51523598 PREDICTED: solute carrier family 8 (sodium/calcium exchanger) nan K14782
gene-evm.TU.Chr13.1717 rna-evm.model.Chr13.1717 Chr13 51530766 51536550 PREDICTED: Short-chain collagen C4 (Fragment) nan K20653
gene-evm.TU.Chr13.1718 rna-evm.model.Chr13.1718 Chr13 51539125 51571520 PREDICTED: Serine/threonine-protein kinase Chk1 GO:0004672;GO:0005524;GO:0006468 K02216
gene-evm.TU.Chr13.1719 rna-evm.model.Chr13.1719 Chr13 51568494 51591290 PREDICTED: Probable signal peptidase complex subunit 2 GO:0005787;GO:0006465;GO:0008233;GO:0016020 K12947
gene-evm.TU.Chr13.172 rna-evm.model.Chr13.172 Chr13 5030591 5031316 uncharacterized protein nan K26537
gene-evm.TU.Chr13.1720 rna-evm.model.Chr13.1720 Chr13 51598739 51614391 PREDICTED: Integrator complex subunit 6-A nan K13143
gene-evm.TU.Chr13.1722 rna-evm.model.Chr13.1722 Chr13 51627191 51675410 PREDICTED: Cohesin subunit SA-1 nan K06671

For more detailed data, you can explore the Download section to access the full dataset.