CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr13.1675 rna-evm.model.Chr13.1675 Chr13 50780681 50841877 PREDICTED: Leucine-rich repeat and calponin homology domain-containing protein 3 GO:0005515 K08844
gene-evm.TU.Chr13.1676 rna-evm.model.Chr13.1676 Chr13 50851025 50854999 uncharacterized protein nan K01138
gene-evm.TU.Chr13.1677 rna-evm.model.Chr13.1677 Chr13 50872601 50875027 uncharacterized protein nan nan
gene-evm.TU.Chr13.1678 rna-evm.model.Chr13.1678 Chr13 50877010 50880307 PREDICTED: Migration and invasion enhancer 1 nan K07401
gene-evm.TU.Chr13.1679 rna-evm.model.Chr13.1679 Chr13 50882486 50884405 uncharacterized protein nan K01137
gene-evm.TU.Chr13.168 rna-evm.model.Chr13.168 Chr13 4890980 4898751 uncharacterized protein nan K08385
gene-evm.TU.Chr13.1680 rna-evm.model.Chr13.1680 Chr13 50888630 50892748 uncharacterized protein nan nan
gene-evm.TU.Chr13.1683 rna-evm.model.Chr13.1683 Chr13 50913062 50936290 PREDICTED: Mitogen-activated protein kinase kinase kinase 1 GO:0003676;GO:0004672;GO:0005524;GO:0006468 K04416
gene-evm.TU.Chr13.1684 rna-evm.model.Chr13.1684 Chr13 50950283 50952540 uncharacterized protein nan nan
gene-evm.TU.Chr13.1688 rna-evm.model.Chr13.1688 Chr13 51014083 51017534 uncharacterized protein nan nan

For more detailed data, you can explore the Download section to access the full dataset.