CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr13.1628 rna-evm.model.Chr13.1628 Chr13 48063372 48065448 uncharacterized protein nan nan
gene-evm.TU.Chr13.163 rna-evm.model.Chr13.163 Chr13 4834663 4842608 PREDICTED: exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-] nan K10865
gene-evm.TU.Chr13.1630 rna-evm.model.Chr13.1630 Chr13 48138213 48138599 PREDICTED: Putative apoptosis inhibitor ORF99 nan K04725
gene-evm.TU.Chr13.1631 rna-evm.model.Chr13.1631 Chr13 48147486 48161923 PREDICTED: WD repeat and FYVE domain-containing protein 2 GO:0005515;GO:0046872 K23532
gene-evm.TU.Chr13.1632 rna-evm.model.Chr13.1632 Chr13 48169286 48175990 PREDICTED: Dehydrogenase/reductase SDR family member 12 nan K11168
gene-evm.TU.Chr13.1634 rna-evm.model.Chr13.1634 Chr13 48240648 48303840 PREDICTED: Filamin-A GO:0005515 K04437
gene-evm.TU.Chr13.1635 rna-evm.model.Chr13.1635 Chr13 48308258 48315186 PREDICTED: Monocarboxylate transporter 5 GO:0016020;GO:0055085 K08181
gene-evm.TU.Chr13.1637 rna-evm.model.Chr13.1637 Chr13 48353961 48355220 uncharacterized protein nan nan
gene-evm.TU.Chr13.1638 rna-evm.model.Chr13.1638 Chr13 48357781 48359040 uncharacterized protein nan nan
gene-evm.TU.Chr13.1639 rna-evm.model.Chr13.1639 Chr13 48360174 48362756 PREDICTED: acetyl-CoA C-acetyltransferase [EC:2.3.1.9] nan nan

For more detailed data, you can explore the Download section to access the full dataset.