CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr13.1599 rna-evm.model.Chr13.1599 Chr13 47532432 47544037 uncharacterized protein nan nan
gene-evm.TU.Chr13.16 rna-evm.model.Chr13.16 Chr13 315347 326150 PREDICTED: E3 ubiquitin-protein ligase RNF216 [EC:2.3.2.31] nan K04423
gene-evm.TU.Chr13.160 rna-evm.model.Chr13.160 Chr13 4709408 4720294 uncharacterized protein nan K06776
gene-evm.TU.Chr13.1601 rna-evm.model.Chr13.1601 Chr13 47614016 47631352 PREDICTED: Calcium-activated chloride channel regulator 1 nan K05027
gene-evm.TU.Chr13.1602 rna-evm.model.Chr13.1602 Chr13 47639918 47665919 PREDICTED: Calcium-activated chloride channel regulator 1 nan K05027
gene-evm.TU.Chr13.1603 rna-evm.model.Chr13.1603 Chr13 47682639 47691873 PREDICTED: IgGFc-binding protein nan K23819
gene-evm.TU.Chr13.1604 rna-evm.model.Chr13.1604 Chr13 47703418 47704799 PREDICTED: IgGFc-binding protein nan nan
gene-evm.TU.Chr13.1607 rna-evm.model.Chr13.1607.1 Chr13 47768430 47779998 PREDICTED: low density lipoprotein receptor-related protein 5/6 nan K19894
gene-evm.TU.Chr13.1608 rna-evm.model.Chr13.1608 Chr13 47796486 47834577 PREDICTED: Perlucin nan K06468
gene-evm.TU.Chr13.1609 rna-evm.model.Chr13.1609 Chr13 47836320 47877991 PREDICTED: Calcium-activated chloride channel regulator 1 nan K05027

For more detailed data, you can explore the Download section to access the full dataset.