CBMDAS Database

About the CBMDAS Database

The CBMDAS database is a comprehensive repository of genomic information related to marine species. This database contains detailed data on various genes, their descriptions, and the associated genomic locations. It aims to support marine biology research by providing a rich source of genomic data for researchers.

Data Structure

Here is an overview of the structure of the data:

Field Description
Gene Id The name of the gene (e.g., BRCA1, TP53).
Transcript Id A brief description of the gene, including its function and relevance to marine biology.
CHROM The chromosomal location or specific genomic coordinates of the gene.
Start The location of the gene start on the chromosome.
End The location of the end of the gene on the chromosome.
Description Description of a clam gene.
GO Term The GO term to which the gene belongs.
KO KEGG data corresponding to genes are KO.

Gene Information

Gene Id Transcript Id CHROM Start End Description GO Term KO
gene-evm.TU.Chr13.1558 rna-evm.model.Chr13.1558 Chr13 46673913 46680968 uncharacterized protein nan nan
gene-evm.TU.Chr13.156 rna-evm.model.Chr13.156 Chr13 4604230 4627438 PREDICTED: Zinc finger B-box domain-containing protein 1 GO:0008270 K13171
gene-evm.TU.Chr13.1560 rna-evm.model.Chr13.1560 Chr13 46712641 46713219 uncharacterized protein nan K06526
gene-evm.TU.Chr13.1561 rna-evm.model.Chr13.1561 Chr13 46750711 46753410 uncharacterized protein nan K26730
gene-evm.TU.Chr13.1562 rna-evm.model.Chr13.1562 Chr13 46767500 46784885 PREDICTED: conserved Plasmodium protein, unknown function nan K06094
gene-evm.TU.Chr13.1563 rna-evm.model.Chr13.1563 Chr13 46797950 46824969 PREDICTED: ankyrin repeat domain-containing protein 50 nan K02123
gene-evm.TU.Chr13.1564 rna-evm.model.Chr13.1564 Chr13 46851900 46871114 PREDICTED: Protein O-mannosyl-transferase TMTC4 GO:0005515 K23424
gene-evm.TU.Chr13.1566 rna-evm.model.Chr13.1566 Chr13 46939981 46941290 PREDICTED: Protein GVQW3 nan K11433
gene-evm.TU.Chr13.1568 rna-evm.model.Chr13.1568 Chr13 46956941 46972127 PREDICTED: synaptonemal complex central element protein 1 nan K19534
gene-evm.TU.Chr13.1569 rna-evm.model.Chr13.1569 Chr13 46974636 46986126 PREDICTED: EF-hand domain-containing family member C2 GO:0005509 K23029

For more detailed data, you can explore the Download section to access the full dataset.